This dataset is a small (30 cases) simulated outbreak originally used to
illustrate outbreaker, and used for the same purposes in
outbreaker2. This list contains the following:
Usage
fake_outbreak
Arguments
Format
An object of class list of length 5.
Details
$onset: A vector of integers representing dates of onset.
$sample: A vector of integers representing the dates of isolation.
$dna: A DNAbin matrix of pathogen genome sequences.
$w: A numeric vector giving the empirical distribution of the
generation time.
$ances: A vector of integers indicating, for each case, the true
infectors. NA represents imported cases.