Calculating Diversity Curves Across Multiple Datasets
Convert Simulated Taxon Data into a Phylogeny
Fit Models of Sampling Rates to Continuous-Time Taxon Ranges
Simplified Optimizer for paleotree Likelihood Functions
Morphlogical Character and Range Data for late Ordovician and Early Silurian Graptoloidea
Probability of being a sampled ancestor of another sampled taxon
Simulate Cladogenetic Trait Evolution
Comparing the Time-Scaling of Trees
Absolute Dates for Nodes of a Time-Scaled Phylogeny
Calculates Values for Foote's Inverse Survivorship Analyses
Paint Tree Branch Depth by Color
paleotree: Paleontological and Phylogenetic Analyses of Evolution
Plot a Traitgram for Continuous Traits
Time-Slicing a Phylogeny
Joint Probability of A Clade Surviving Infinitely or Being Sampled Once
Bin Simulated Temporal Ranges in Discrete Intervals
Randomly Collapse a Portion of Nodes on a Phylogeny
Simulating Taxa in the Fossil Record, Conditioned on Sampling Rate
Diversity Curves
Fit Models of Sampling Probability to Discrete-Interval Taxon Ranges
Simulate a Set of Parsimony-Informative Characters for a Phylogeny
Frequency Ratio Method for Estimating Sampling Probability
Partitions the branch lengths of a tree into several classes based on their placement.
Simulating Un-Conditioned Trees of Fossil Taxa
perCapitaRates
Three Rate Calibrated Timescaling of Paleo-Phylogenies
Timescaling of Paleo-Phylogenies
Nearest Neighbor Distances for Morphological Disparity Studies
Scales Edge Lengths of a Phylogeny to a Minimum Branch Length
Constrain Parameters for a Model Function from paleotree
Scale Tree to Unit-Length
Model Function Methods: Parameter Names, Bounds and Initial Values
Extrapolating Lower-Level Taxon Phylogenies from Higher-Level Taxon Trees
Construct a Stochastic Sequenced Time-List from an Unsequenced Time-List
Sampling Taxon Ranges
Resolve Polytomies by Order of First Appearance
Convert Simulated Taxon Data into a Cladogram
Cladogram and Range Data for the Retiolitinae
Split Tip Taxa by Root Divergence
Modify or Drop Terminal Branches of Various Types
Estimate Sampling Rate from Sampling Horizon Data (Solow and Smith, 1997)
Models of Sampling and Extinction for Taxonomic Duration Datasets
Inverse Survivorship Models in the Fossil Record
Converting Sampling Estimates
Reverse List Structure
Simulating Taxa in the Fossil Record
Simulating Extinct Clades of Monophyletic Taxa