palmid (version 0.0.3)

geoFilter2: Conversion between run_ids and geo objects often contain NA/NULL values This removes NA-containing rows

Description

Conversion between run_ids and geo objects often contain NA/NULL values This removes NA-containing rows

Usage

geoFilter2(palm.sra, wobble = FALSE, wradius = 0.005)

Arguments

palm.sra

data.frame, output df from get.sraGeo()

wobble

boolean, add a wobble to each point to prevent overplotting [FALSE]

wradius

numeric, maximum magnitude of wobble [0.005]

Value

modified palm.sra data.frame

Examples

# NOT RUN {
data("waxsys.palm.sra")
# waxsys.palm.sra
# -- 4159 rows

waxsys.geo.filtered <- geoFilter2(waxsys.palm.sra)
# -- 2300 rows

# 2300 / 4159 SRA-libraries have associated geospatial meta-data

# }