palmid (version 0.0.3)

get.proTax: A wrapper for get.tax() specific for 'pro.df' input and returns a populated the "tspe", "tfam", and "tphy" columns of 'pro.df' based on the "sseqid" column

Description

A wrapper for get.tax() specific for 'pro.df' input and returns a populated the "tspe", "tfam", and "tphy" columns of 'pro.df' based on the "sseqid" column

Usage

get.proTax(pro.df, con = SerratusConnect())

Arguments

pro.df

data.frame, imported diamond pro df. use get.pro()

con

pq-connection, use SerratusConnect()

Value

pro.df data.frame

Examples

# NOT RUN {
## Prepare data
# data("waxsys.pro.df")
# con <- SerratusConnect()

## Generate Report
# geoSRA <- PlotGeoReport( waxsys.pro.df )


# }