pamr (version 1.25)

pamr.menu: A function that interactively leads the user through a PAM analysis

Description

A function that interactively leads the user through a PAM analysis

Usage

pamr.menu(data)

Arguments

data

A list with at least two components: x- an expression genes in the rows, samples in the columns), and y- a vector of the class labels for each sample. Same form as data object used by pamr.train.

Value

Details

pamr.menu provides a menu for training, cross-validating and plotting a nearest shrunken centroid analysis.

Examples

set.seed(120)
x <- matrix(rnorm(1000*20),ncol=20)
y <- sample(c(1:4),size=20,replace=TRUE)
mydata <- list(x=x,y=y)
#  pamr.menu(mydata)