plotHeatmap

internal

A 'shiny' GUI that performs high dimensional cluster analysis.
This tool performs data preparation, clustering and visualisation within a dynamic GUI.
With interactive methods allowing the user to change settings all without having to to leave the GUI.
An earlier version of this package was described in Laa and Valencia (2022) <doi:10.1140/epjp/s13360-021-02310-1>.

Gabriel McCoy

pandemonium

High Dimensional Analysis in Linked Spaces

Ursula Laa

German Valencia

plotHeatmap function

<dl><dt>dat</dt>
<dd>coordinate representation of points</dd>
<dt>fit</dt>
<dd>result from hclust</dd>
<dt>k</dt>
<dd>number of clusters</dd>
<dt>pal</dt>
<dd>color palette</dd></dl>

Arguments

Plot heatmap with dendrogram — plotHeatmap

<dl>

<dt>dat</dt>
<dd>coordinate representation of points</dd>


<dt>fit</dt>
<dd>result from hclust</dd>


<dt>k</dt>
<dd>number of clusters</dd>


<dt>pal</dt>
<dd>color palette</dd>

</dl>

plotHeatmap: Plot heatmap with dendrogram

Description

Usage

Value

Arguments