plotWC

Parameter values no longer need to be on a regular grid pattern for this plot.(modified)

internal

A 'shiny' GUI that performs high dimensional cluster analysis.
This tool performs data preparation, clustering and visualisation within a dynamic GUI.
With interactive methods allowing the user to change settings all without having to to leave the GUI.
An earlier version of this package was described in Laa and Valencia (2022) <doi:10.1140/epjp/s13360-021-02310-1>.

Gabriel McCoy

pandemonium

High Dimensional Analysis in Linked Spaces

Ursula Laa

German Valencia

plotWC function

<dl><dt>wc</dt>
<dd>parameter values as matrix</dd>
<dt>x, y</dt>
<dd>variables names (as string) to map to x and y axis</dd>
<dt>interest</dt>
<dd>index values for the intersting points</dd>
<dt>bmID</dt>
<dd>index values of benchmarks</dd>
<dt>col</dt>
<dd>color vector according to cluster assignment</dd>
<dt>cond</dt>
<dd>row numbers of points used for conditioning</dd>
<dt>groups</dt>
<dd>grouping assignments used to make alphahull</dd>
<dt>pal</dt>
<dd>pallete used for group colouring of alphahull</dd>
<dt>a</dt>
<dd>alpha value for alpha hull</dd>
<dt>showalpha</dt>
<dd>boolean value to calculate and show alpha hulls</dd></dl>

Arguments

Show clusters in parameter space — plotWC

<dl>

<dt>wc</dt>
<dd>parameter values as matrix</dd>


<dt>x, y</dt>
<dd>variables names (as string) to map to x and y axis</dd>


<dt>interest</dt>
<dd>index values for the intersting points</dd>


<dt>bmID</dt>
<dd>index values of benchmarks</dd>


<dt>col</dt>
<dd>color vector according to cluster assignment</dd>


<dt>cond</dt>
<dd>row numbers of points used for conditioning</dd>


<dt>groups</dt>
<dd>grouping assignments used to make alphahull</dd>


<dt>pal</dt>
<dd>pallete used for group colouring of alphahull</dd>


<dt>a</dt>
<dd>alpha value for alpha hull</dd>


<dt>showalpha</dt>
<dd>boolean value to calculate and show alpha hulls</dd>

</dl>

plotWC: Show clusters in parameter space

Description

Usage

Value

Arguments