parseRPDR (version 0.2.3)

data_rdt: Example of processed rdt.txt output from RPDR using the load_rdt() function.

Description

Result of a rdt.txt output from RPDR loaded into a data table in R using load_rdt().

**NOTE**: Due to potential issues with PHI and PPI, the example datasets can be downloaded from the Partners Gitlab repository under *parserpdr-sample-data*.

Usage

data_rdt

Value

data table, with radiological exam information.

ID_MERGE

numeric, defined IDs by merge_id, used for merging later.

ID_rdt_EMPI

string, Unique Partners-wide identifier assigned to the patient used to consolidate patient information from rdt datasource, corresponds to EMPI in RPDR. Data is formatted using pretty_mrn().

ID_rdt_PMRN

string, Epic medical record number. This value is unique across Epic instances within the Partners network from rdt datasource, corresponds to EPIC_PMRN in RPDR. Data is formatted using pretty_mrn().

ID_con_loc

string, if mrn_type == TRUE, then the data in MRN_Type and MRN are parsed into IDs corresponding to locations. Data is formatted using pretty_mrn().

time_rad_exam

POSIXct, Date of the radiology exam, corresponds to Date in RPDR. Converted to POSIXct format.

rad_mode

string, Modality of the exam, corresponds to Mode in RPDR. Punctuation marks and white spaces are removed.

rad_group

string, Higher-level grouping concept used to consolidate similar procedures across hospitals, corresponds to Group in RPDR. Punctuation marks and white spaces are removed.

rad_test_code

string, Internal identifier for the procedure used by the source system, corresponds to Test_Code in RPDR.

rad_test_desc

string, Full name of the exam/study performed, corresponds to Test_Description in RPDR.

rad_accession

string, Identifier assigned to the report or procedure for Radiology tracking purposes, corresponds to Accession_Number in RPDR.

rad_provider

string, Ordering or authorizing provider for the study, corresponds to Provider in RPDR. Punctuation marks are removed.

rad_clinic

string, Specific department/location where the procedure was ordered or performed, corresponds to Clinic in RPDR. Punctuation marks are removed.

rad_hosp

string, Facility where the order was entered, corresponds to Hospital in RPDR. Punctuation marks and white spaces are removed.

rad_inpatient

string, Classifies the type of encounter where the procedure was performed, corresponds to Inpatient_Outpatient in RPDR. Punctuation marks are removed.

Format

data.table