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partitionComparison (version 0.2.5)

sokalSneath1: Sokal & Sneath Index 1

Description

Compute the index 1 of Sokal and Sneath $$ \frac{1}{4} \left( \frac{N_{11}}{N_{21}} + \frac{N_{11}}{N_{12}} + \frac{N_{00}}{N'_{10}} + \frac{N_{00}}{N'_{01}} \right) $$

Usage

sokalSneath1(p, q)

# S4 method for Partition,Partition sokalSneath1(p, q)

# S4 method for PairCoefficients,missing sokalSneath1(p, q = NULL)

Arguments

p

The partition \(P\) or an instance of PairCoefficients

q

The partition \(Q\) or NULL

Methods (by class)

  • p = Partition,q = Partition: Compute given two partitions

  • p = PairCoefficients,q = missing: Compute given the pair coefficients

Author

Fabian Ball fabian.ball@kit.edu

References

Sokal1963partitionComparison

Examples

Run this code
isTRUE(all.equal(sokalSneath1(new("Partition", c(0, 0, 0, 1, 1)), 
                             new("Partition", c(0, 0, 1, 1, 1))), 7/12))

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