patPRO-package:
Longitudinal Profiler of Microbiome Data
Description
patPRO (short for Patient Profiler) is a package for formatting Qiime microbiome analysis output files for downstream analyses and generating powerful graphics for visualizing longitudinal datasets per patient or averages of patient cohorts.
Details
|
Package: |
| patPRO |
|
Type: |
| Package |
|
Version: |
| 1.0.0 |
|
Date: |
| 2015-09-18 |
|
License: |
| GPLv3 |
An overview of how to use the package, including the most important functions, is included in the supplemental R notebook patPROExampleWorkflow.html.
References
patPRO: An R package for the visualization of longitudinal microbiome data. [Submitted] Hannigan GD, Loesche MA, Hodkinson BP, Mehta S, Grice EA. Bioinformatics.