patPRO (version 1.1.0)

transposeRelAbund: Transpose a Data Frame.

Description

This function will transpose a data frame, with the result maintained as a data frame (unlike other functions which work with matrices). Although this was written with relative abundance tables in mind, it may be applied to other data frame types.

Usage

transposeRelAbund(x, 
	sample.id.col="SampleID")

Arguments

x

The relative abundance data.frame (or other type of data.frame) to be transposed.

sample.id.col

The Sample ID column name from data frame x. Default is "SampleID".

Details

Package:

patPRO

Type:

Package

Version:

1.0.0

Date:

2015-09-18

License:

GPLv3

An overview of how to use the package, including the most important functions, is included in the supplemental R notebook patPROExampleWorkflow.html.

References

patPRO: An R package for the visualization of longitudinal microbiome data. Hannigan GD, Loesche MA, Hodkinson BP, Mehta S, Grice EA.

Examples

data("PatProOTU",package="patPRO")
transTestRelAbund <- transposeRelAbund(PatProOTU)