pathClass (version 0.9.4)

read.hprd: Parse the HPRD flat file

Description

This function parses the tab delimited flat file of protein-protein interactions coming from the HPRD (http://www.hprd.org/download).

Usage

read.hprd(fname, chipProteins = NULL)

Arguments

fname
path to the HPRD flat file.
chipProteins
limit the resulting adjacency matrix to certain proteins.

Value

An adjacency matrix

Examples

Run this code
## Not run: 
# hprd <- read.hprd('BINARY_PROTEIN_PROTEIN_INTERACTIONS.txt')
# ## End(Not run)

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