Learn R Programming

pavian (version 1.0.0)

read_report: Read Kraken-style and MetaPhlAn reports

Description

Read Kraken-style and MetaPhlAn reports

Usage

read_report(myfile, has_header = NULL, check_file = FALSE)

Arguments

myfile

Kraken-style or MetaPhlAn report file.

has_header

If the kraken report has a header or not.

check_file

If TRUE, only the first 5 lines of the file are loaded.

Value

report data.frame