pbat.help

pbat.firsttime

Whether you think a bug was found on a run. Will attempt to
    generate some useful information for the developers.

When bug=TRUE, runs a full bug report (slower, reruns
    analysis, but recommended.

full

Pedigree object that can be obfuscated (see `obfuscate').

Phenotype object that can be obfuscated (see `obfuscate').

a character vector describing the location of R library
    trees to search through, or 'NULL', i.e what/if you specified for
    this when the library was loaded.

lib.loc

Provides some helpful suggestions and information if you are having
  some troubles getting the package set up (often tends to be version
  related). Information useful for reporting.

interface

This package provides data analysis via the pbat program, and an alternative internal implementation of the power calculations via simulation only.  For analysis, this package provides a frontend to the PBAT software, automatically reading in the output from the pbat program and displaying the corresponding figure when appropriate (i.e. PBAT-logrank). It includes support for multiple processes and clusters. For analysis, users must download PBAT and accept it's license, available on the PBAT webpage. Both the data analysis and power calculations have command line and graphical interfaces using tcltk.

pbat.help: Help and Reporting Information

Description

Usage

Arguments

References

See Also