score.plotting

an output from <code>pcadapt</code> containing the scores.

an integer indicating onto which principal component the individuals are projected when the "scores" option is chosen.
Default value is set to <code>1</code>.

an integer indicating onto which principal component the individuals are projected when the "scores" option is chosen.
Default value is set to <code>2</code>.

a list of integers or strings specifying which subpopulation the individuals belong to.


<code>"score.plotting"</code> plots the projection of the individuals onto the first two principal components.


internal

Methods to detect genetic markers involved in biological
adaptation. 'pcadapt' provides statistical tools for outlier detection based on
Principal Component Analysis. Implements the method described in (Luu, 2016)
<DOI:10.1111/1755-0998.12592>.

score.plotting: Principal Components Analysis Scores Plot

Description

Usage

Arguments

Examples