print_convert

<code>print_convert</code> prints out a summary of the file conversion.

internal

Methods to detect genetic markers involved in biological
adaptation. 'pcadapt' provides statistical tools for outlier detection based on
Principal Component Analysis. Implements the method described in (Luu, 2016)
<DOI:10.1111/1755-0998.12592> and later revised in (Privé, 2020)
<DOI:10.1093/molbev/msaa053>.

Florian Privé

pcadapt

Fast Principal Component Analysis for Outlier Detection

Keurcien Luu

Michael Blum

Eric Bazin

Nicolas Duforet-Frebourg

print_convert function

<dl><dt>input</dt>
<dd>a genotype matrix or a character string specifying the name of the file to be converted.</dd>
<dt>output</dt>
<dd>a character string specifying the name of the output file.</dd>
<dt>M</dt>
<dd>an integer specifying the number of genetic markers present in the data.</dd>
<dt>N</dt>
<dd>an integer specifying the number of individuals present in the data.</dd>
<dt>pool</dt>
<dd>an integer specifying the type of data. `0` for genotype data, `1` for pooled data.</dd></dl>

Arguments

Summary — print_convert

<dl>

<dt>input</dt>
<dd>a genotype matrix or a character string specifying the name of the file to be converted.</dd>


<dt>output</dt>
<dd>a character string specifying the name of the output file.</dd>


<dt>M</dt>
<dd>an integer specifying the number of genetic markers present in the data.</dd>


<dt>N</dt>
<dd>an integer specifying the number of individuals present in the data.</dd>


<dt>pool</dt>
<dd>an integer specifying the type of data. `0` for genotype data, `1` for pooled data.</dd>

</dl>

print_convert: Summary

Description

Usage

Arguments