qq_plot

<code>qq_plot</code> plots a Q-Q plot of the p-values computed.

internal

Methods to detect genetic markers involved in biological
adaptation. 'pcadapt' provides statistical tools for outlier detection based on
Principal Component Analysis. Implements the method described in (Luu, 2016)
<DOI:10.1111/1755-0998.12592> and later revised in (Privé, 2020)
<DOI:10.1093/molbev/msaa053>.

Florian Privé

pcadapt

Fast Principal Component Analysis for Outlier Detection

Keurcien Luu

Michael Blum

Eric Bazin

Nicolas Duforet-Frebourg

qq_plot function

<dl><dt>x</dt>
<dd>an output from <code>outlier</code> containing the p-values of interest.</dd>
<dt>K</dt>
<dd>an integer specifying which principal component to display when <code>method="componentwise"</code>.</dd></dl>

Arguments

p-values Q-Q Plot — qq_plot

<dl>

<dt>x</dt>
<dd>an output from <code>outlier</code> containing the p-values of interest.</dd>


<dt>K</dt>
<dd>an integer specifying which principal component to display when <code>method="componentwise"</code>.</dd>

</dl>

qq_plot: p-values Q-Q Plot

Description

Usage

Arguments