pcalg (version 1.1-4)

beta.special: Compute set of intervention effects

Description

This function is DEPRECATED! Use ida instead.

Usage

beta.special(dat=NA, x.pos, y.pos, verbose=0, a=0.01, myDAG=NA,
myplot=FALSE, perfect=FALSE, method="local", collTest=TRUE, pcObj=NA,
all.dags=NA, u2pd="rand")

Arguments

dat

data matrix

x.pos

Column of x in dat

y.pos

Column of y in dat

verbose

0=no comments, 2=detail on estimates

a

significance level of tests for finding CPDAG

myDAG

needed if true correlation matrix shall be computed

myplot

plot estimated graph

perfect

True cor matrix is calculated from myDAG

method

"local" - local (all combinations of parents in regr.); "global" - all DAGs

collTest

True - Exclude orientations of undirected edges that introduce a new collider

pcObj

Fit of PC Algorithm (CPDAG); if this is available, no new fit is done

all.dags

All DAGs in the format of function allDags; if this is available, no new function call allDags is done

u2pd

Function for converting udag to pdag;"rand": udag2pdag;"relaxed": udag2pdagRelaxed;"retry": udag2pdagSpecial

Value

• estimates of intervention effects