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pcrsim (version 0.1.1)

Simulation of the forensic DNA process

Description

pcrsim is a package for simulating the forensic DNA process. pcrsim() opens up a graphical user interface which allow the user to enter parameters required for the simulation. Once calibrated the program can be used to: reduce the laboratory work needed for validation of new STR kits, help develop methods for interpretation of DNA evidence, etc. This is a first version which is still experimental and under development.

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Version

Install

install.packages('pcrsim')

Monthly Downloads

10

Version

0.1.1

License

GPL-2

Issues

Pull Requests

Stars

Forks

Maintainer

Oskar Hansson

Last Published

May 23rd, 2013

Functions in pcrsim (0.1.1)

dyeToColor

Convert dye letter to color name.
ref11

ESX17 Positive Control Profile
pcrsim

GUI for PCR simulator
addSimAlleles

Add simulated alleles
pcrsim-package

Simulation of the forensic DNA process
findPCRprob

Find PCR probabilities
simPCRexplorer

Explore PCR simulator
listToxy

List to xy values
ref1

ESX17 Positive Control Profile
simPCR

PCR simulator
listToDataframe

List to data frame
set1

Typing data in 'GeneMapper' format
heightToPeak

Height to peak.
generateEPG

Generate EPG
alleleToSize

Allele to size
simulateProfile

Simulate DNA profiles
findScaling

Find scaling factor
generateEPGgui

Generate EPG GUI