pctax (version 0.1.1)

ALDEX: ALDEX

Description

ALDEX

Usage

ALDEX(otutab, group_df)

Value

diff

Arguments

otutab

otutab

group_df

a dataframe with rowname same to dist and one group column

References

https://cloud.tencent.com/developer/article/1621879

Examples

# \donttest{
if (requireNamespace("ALDEx2")) {
  data(otutab, package = "pcutils")
  ALDEX(otutab, metadata["Group"]) -> res
  res %>%
    dplyr::top_n(9, -glm.eBH) %>%
    .[, "tax"] -> sig
  data.frame(t(otutab[sig, ])) %>% pcutils::group_box(., "Group", metadata)
}
# }