download_taxonkit_dataset

Provides a comprehensive suite of tools for analyzing omics data. It includes
functionalities for alpha diversity analysis, beta diversity analysis,
differential abundance analysis, community assembly analysis, visualization of
phylogenetic tree, and functional enrichment analysis. With a progressive
approach, the package offers a range of analysis methods to explore and understand
the complex communities. It is designed to support researchers and practitioners
in conducting in-depth and professional omics data analysis.

Peng Chen

pctax

Professional Comprehensive Omics Data Analysis

download_taxonkit_dataset function

<dl><dt>make_sure</dt>
<dd>make sure to do this</dd>
<dt>taxdump_tar_gz</dt>
<dd>your download taxdump_tar_gz file from https://ftp.ncbi.nih.gov/pub/taxonomy/taxdump.tar.gz</dd></dl>

Arguments

Download taxonkit dataset — download_taxonkit_dataset

<dl>

<dt>make_sure</dt>
<dd>make sure to do this</dd>


<dt>taxdump_tar_gz</dt>
<dd>your download taxdump_tar_gz file from https://ftp.ncbi.nih.gov/pub/taxonomy/taxdump.tar.gz</dd>

</dl>

download_taxonkit_dataset: Download taxonkit dataset

Description

Usage

Value

Arguments