b_NTI1

Provides a comprehensive suite of tools for analyzing omics data. It includes functionalities for alpha diversity analysis, beta
diversity analysis, differential abundance analysis, community assembly analysis, visualization of phylogenetic tree, and
functional enrichment analysis. With a progressive approach, the package offers a range of analysis methods to explore and
understand the complex communities. It is designed to support researchers and practitioners in conducting in-depth and
professional omics data analysis.

Peng Chen

pctax

Professional Comprehensive Omics Data Analysis

b_NTI1 function

<dl><dt>phylo</dt>
<dd>a phylo object</dd>
<dt>otutab</dt>
<dd>otutab</dd>
<dt>beta.reps</dt>
<dd>how many simulation performed?</dd>
<dt>weighted</dt>
<dd>logical</dd>
<dt>threads</dt>
<dd>use how many threads to calculate (default:4)</dd>
<dt>verbose</dt>
<dd>verbose</dd></dl>

Arguments

Calculate beta_NTI — b_NTI1

<dl>

<dt>phylo</dt>
<dd>a phylo object</dd>


<dt>otutab</dt>
<dd>otutab</dd>


<dt>beta.reps</dt>
<dd>how many simulation performed?</dd>


<dt>weighted</dt>
<dd>logical</dd>


<dt>threads</dt>
<dd>use how many threads to calculate (default:4)</dd>


<dt>verbose</dt>
<dd>verbose</dd>

</dl>

b_NTI1: Calculate beta_NTI

Description

Usage

Value

Arguments