plotEICFit

(list) list of <code>data.frame</code> of raw data points for each sample (retention time "rt", mass "mz" and intensity "int" (as column) of each raw data points (as row)).

ROIDataPointSampleList

(list) NULL or a list of <code>peakPantheR_curveFit</code> (or NA) for each sample

curveFitSampleList

(float) NULL or vector of detected peak minimum retention time (in sec)

rtMin

(float) NULL or vector ofdetected peak maximum retention time (in sec)

rtMax

(int) Number of points to employ when plotting fittedCurve

sampling

(str) NULL or vector colour for each sample (same length as <code>ROIDataPointSampleList</code>, <code>rtMin</code>, <code>rtMax</code>)

sampleColour

(bool) if TRUE message when NA scans are removed

verbose

plot a ROI across multiple samples (x axis is RT, y axis is intensity). If curveFit is provided, the fitted curve for each sample is added.

An automated pipeline for the detection, integration and reporting of predefined features across a large number of mass spectrometry data files.

plotEICFit: Plot samples raw data and detected feature for a single ROI

Description

Usage

Arguments

Value