pedgene (version 2.7)

example.geno: Example datasets for pedgene

Description

example.geno: a data frame with minor allele count for subjects (rows) at variant positions (columns); example.ped: pedigree and trait data for subjects in example.geno; example.map: gene and chromosome for variant positions in example.geno

Usage

data(example.geno)
data(example.ped)
data(example.map)

format

example.geno -data frame with minor allele count for 20 variant positions:

• ped

{pedigree ID, character or numeric} person{person ID, used with ped to match subjects to their row in example.ped} AA.1-AA.10,AX.1-AX.10{genotype columns at 10 positions for each of 2 simulated genes}

code

example.map

itemize

• chrom

item

• person
• father
• mother
• sex
• trait
• trait.adjusted
• gene

source

Simulated data for testing purposes

Examples

data(example.geno)
data(example.ped)
data(example.map)