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pegas (version 0.1)
Population and Evolutionary Genetics Analysis System
Description
pegas provides functions for reading, writing, plotting, analysing, and manipulating allelic data
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Install
install.packages('pegas')
Monthly Downloads
9,068
Version
0.1
License
GPL (>= 2)
Maintainer
Emmanuel Paradis
Last Published
May 13th, 2009
Functions in pegas (0.1)
Search all functions
amova
Analysis of Molecular Variance
hw.test
Test of Hardy--Weinberg Equilibrium
Fst
F-Statistics
utilities
Utily Functions for pegas
pegas-package
Population and Evolutionary Genetics Analysis System
read.loci
Read Allelic Data Files
R2.test
Ramos-Onsins--Rozas Test of Neutrality
read.gtx
Read Genetix Data Files
haplotype
Haplotype Extraction and Frequencies
haploNet
Haplotype Networks
summary.loci
Print and Summaries of Loci Objects
write.loci
Write Allelic Data Files
MMD
Mismatch Distribution
as.loci
Conversion Among Allelic Data Classes
tajima.test
Test of the Neutral Mutation Hypothesis