pegas (version 1.1)

Population and Evolutionary Genetics Analysis System

Description

Functions for reading, writing, plotting, analysing, and manipulating allelic and haplotypic data, including from VCF files, and for the analysis of population nucleotide sequences and micro-satellites including coalescent analyses, linkage disequilibrium, population structure (Fst, Amova) and equilibrium (HWE), haplotype networks, minimum spanning tree and network, and median-joining networks.

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Install

install.packages('pegas')

Monthly Downloads

3,954

Version

1.1

License

GPL (>= 2)

Last Published

December 16th, 2021

Functions in pegas (1.1)