Project-class

Provides an in-memory representation and functions to access project
configuration and sample annotation values for a PEP.

A PEP, or Portable Encapsulated Project, is a dataset that
subscribes to the PEP structure for organizing metadata. It is written using
a simple YAML + CSV format, it is your one-stop solution to metadata
management across data analysis environments. This package reads this
standardized project configuration structure into R.

Michal Stolarczyk

pepr

Reading Portable Encapsulated Projects

Nathan Sheffield

Project-class function

<dl class="dl-horizontal">
<dt><code>file</code></dt><dd>character vector path to config file on disk.</dd></dl><dt><code>samples</code></dt><dd>a data table object holding the sample metadata</dd><dt><code>config</code></dt><dd>a list object holding contents of the config file</dd>

Project-class: Portable Encapsulated Project object

Description

Arguments

Slots

Details