.Random.seed

.eco.evo.clade.regression

.eco.evo.regression

.eco.null

.eco.phy.regression

.plot.regression

.prepare.regression.output

.summary.regression

summary.phy.structure

.removeErrors

internal

pez-internal

Eco-phylogenetic and community phylogenetic analyses.
Keeps community ecological and phylogenetic data matched up and
comparable using 'comparative.comm' objects. Wrappers for common
community phylogenetic indices ('pez.shape', 'pez.evenness',
'pez.dispersion', and 'pez.dissimilarity' metrics). Implementation
of Cavender-Bares (2004) correlation of phylogenetic and
ecological matrices ('fingerprint.regression'). Phylogenetic
Generalised Linear Mixed Models (PGLMMs; 'pglmm') following Ives &
Helmus (2011) and Rafferty & Ives (2013). Simulation of null
assemblages, traits, and phylogenies ('scape', 'sim.meta.comm').

William Pearse

Phylogenetics for the Environmental Sciences

Jeannine Cavender-Bares

Caroline Tucker

pez-internal function

Internal pez Functions — pez-internal

Internal pez Functions

pez-internal: Internal pez Functions

Description

Arguments

Details