phangorn (version 2.0.3)

cophenetic.networx: Pairwise Distances from a Phylogenetic Network

Description

cophenetic.networx computes the pairwise distances between the pairs of tips from a phylogenetic network using its branch lengths.

Usage

## S3 method for class 'networx':
cophenetic(x)
## S3 method for class 'splits':
cophenetic(x)

Arguments

x

an object of class "networx".

Value

• an object of class dist names set to the names of the tips (as given by the element tip.label of the argument x).

See Also

cophenetic for the generic function, neighborNet to construct a network from a distance matrix