phase (version 1.2.9)

indActogram: Plot actogram of individual fly

Description

Allows users to generate individual actograms. The input for this function must be the output of the binData() function. The output of this function is a plotly object.

Usage

indActogram(
  data,
  bin = 30,
  t.cycle = 24,
  ind = 1,
  key.acto = 1,
  color = rgb(0, 0, 0, 1)
)

Value

A plotly

htmlwidget with the actogram of a user defined fly.

Arguments

data

Input data file. The input for this function must be the output of the function binData(). See ??binData().

bin

Define the bin size (in minutes) in which input data is saved.

t.cycle

Define the period of the environmental cycle or a single day in hours. This defaults to 24.

ind

The channel number (or individual) whose actogram must be plotted.

key.acto

Key for reactive input tables in the shiny app.

color

Color of actograms in rgb format. The input for this must be a vector with 4 values, i.e., r,g,b,transparency. The values for r,g,b can only be between 0 and 1. 0,0,0 would be black and 1,1,1 would be white. Transparency values can also go from 0 to 1, 0 being fully transparent and 1 being fully opaque.

Examples

if (FALSE) {
td <- trimData(data = df, start.date = "19 Dec 20", start.time = "21:00",
n.days = 10, bin = 1, t.cycle = 24)
bd <- binData(td)
ind.actogram <- indActogram(data = bd, bin = 30, ind = 2)
}