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pheble

pheble is a software package for classifying high-dimensional phenotypes with ensemble learning.

To install the current pheble R package from CRAN:

Within R:

install.packages("pheble")

To install the current pheble R package from Github using devtools:

Within R:

install.packages("devtools")

devtools::devtools::install_github(“jaydevine/pheble”)

For any questions, you can contact the author via email: jay.devine1@ucalgary.ca

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Version

Install

install.packages('pheble')

Monthly Downloads

7

Version

0.1.0

License

GPL (>= 3)

Maintainer

Jay Devine

Last Published

May 17th, 2023

Functions in pheble (0.1.0)

ph_outs

Find outlier indices.
ph_prep

Preprocessing for phenotype classification via ensemble learning.
ph_equate

Equate factors levels.
ph_stickleback

Data from: Sexually mediated phenotypic variation within and between sexes as a continuum structured by ecology: The mosaic nature of skeletal variation across body regions in Threespine stickleback (Gasterosteus aculeatus L.)
reexports

Pipe.
ph_train

Generate predictions for phenotype ensemble.
ph_eval

Evaluate a phenotype classification model.
ph_iqr

Compute interquartile range.
ph_crocs

Data from: The utility of cranial ontogeny for phylogenetic inference: a case study in crocodylians using geometric morphometrics
ph_ctrl

Parameters for resampling and training a dataset.
Global variables.

Global variables.
ph_anomaly

Detect anomalies.
ph_ensemble

Classify phenotypes via ensemble learning.