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pheno (version 1.5)

Auxiliary functions for phenological data analysis

Description

Provides some easy-to-use functions for time series analyses of (plant-) phenological data sets. These functions mainly deal with the estimation of combined phenological time series and are usually wrappers for functions that are already implemented in other R packages adapted to the special structure of phenological data and the needs of phenologists. Some date conversion functions to handle Julian dates are also provided.

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Version

Install

install.packages('pheno')

Monthly Downloads

351

Version

1.5

License

GPL (>= 2)

Maintainer

Joerg Schaber

Last Published

October 16th, 2009

Functions in pheno (1.5)

Searle

Example of a two-way classification table
DWD

Phenological observations
daylength

Daylength at julian day i on latitude l
maxdaylength

Maximal day length on latitude l
jul2date2

Converts Julian date to integers day,month,year
pheno.flm.fit

Fits a two-way linear fixed model
pheno.mlm.fit

Fits a two-way linear mixed model
daysbetween

Number of days between two dates
matrix2raw

Converts numeric matrix to data frame
pheno.ddm

Dense design matrix for phenological data
jul2date1

Converts Julian date into string date
tau

Kendall's normalized tau
getConnectedSets

Finds connected sets in a matrix or data frame
seqMK

Sequential Mann-Kendall test for time series.
date2jul2

Converts a date (day,month,year) to Julian date
raw2matrix

Converts a numeric data frame to matrix
maxConnectedSet

Maximal connected set in a matrix
Simple

Simple example of a two-way classification table
pheno.lad.fit

Fits a robust two-way linear model
leapyear

Boolean test for leap year
connectedSets

Connected sets in a matrix
date2jul1

Converts string date to Julian date