getVars2test


Returns an object containing the names of the variables that were tested
when the epheno object was created.
Will return an object of class list. Variables of the same type
(categorical, survival, etc) will be in the same slot of the list. The
slot names are the types of the variables.


datasets

Tools to test correlation between gene expression and
phenotype in a way that is efficient, structured, fast and
scalable. GSEA is also provided.

Evarist Planet

phenoTest

Tools to test association between gene expression and phenotype
in a way that is efficient, structured, fast and scalable. We
also provide tools to do GSEA (Gene set enrichment analysis)
and copy number variation.

getVars2test function

Returns an object containing the names of the variables that were tested
when the epheno object was created.
Will return an object of class list. Variables of the same type
(categorical, survival, etc) will be in the same slot of the list. The
slot names are the types of the variables.

getVars2test: Get phenotypic variables that were tested.

Description

Arguments

Examples