phenology (version 3.40)

read_folder: Open all file present in a folder and create a list with these files

Description

To create a new list, the syntaxe is datalist<-read_folder(folder=".", read=read.delim, header=FALSE)

Usage

read_folder(folder = ".", read = read.delim, ...)

Arguments

folder

Where to search for files

read

Function used to read file. Ex: read.delim

...

Parameters send to the read function

Value

• Return a list of the data in the files of the folder (directory for windows users)

Details

read_folder opens all files from a folder

Examples

library(phenology)
# Read all the files from a folder/directory
# Gratiot<-read_folder(".")
data(Gratiot)
# Generate a formatted list nammed data_Gratiot
data_Gratiot<-add_format(add=Gratiot, name="Complete", reference=as.Date("2001-01-01"), format="%d/%m/%Y")
# Generate initial points for the optimisation
parg<-par_init(data_Gratiot, parametersfixed=NULL)
# Run the optimisation
# result_Gratiot<-fit_phenology(data=data_Gratiot, parametersfit=parg, parametersfixed=NULL, trace=1)
data(result_Gratiot)
# Plot the phenology and get some stats
output<-plot_phenology(result=result_Gratiot, pdf=FALSE)