diseaseDxIcdMap

This table provides a mapping between 27 Mendelian diseases and the
corresponding ICD-9 and ICD-10 codes that indicate a genetic diagnosis.

datasets

Use phenotype risk scores based on linked clinical and genetic data
to study Mendelian disease and rare genetic variants. See Bastarache et al.
2018 <doi:10.1126/science.aal4043>.

Jake Hughey

phers

Calculate Phenotype Risk Scores

Layla Aref

diseaseDxIcdMap function

A data.table with the following columns:<ul>
<li><code>disease_id</code>: Numeric vector of OMIM disease identifiers</li>
<li><code>disease_name</code>: Character vector of disease names</li>
<li><code>icd</code>: Character vector of ICD codes indicating a genetic diagnosis</li>
<li><code>flag</code>: Integer vector of the vocabulary of the ICD code
(9: ICD-9-CM, 10: ICD-10-CM)</li>
<li><code>icd_name</code>: Character vector containing the description of each ICD code</li>
</ul>

diseaseDxIcdMap: Mapping of diseases and diagnostic ICD codes

Description

Usage

Arguments

Format

See Also