Plotting phylogenetic trees and associated data
tip.data.plot(
xxyy,
type = c("phylogram", "cladogram", "fan"),
show.tip.label = TRUE,
show.node.label = FALSE,
rot = 0,
tip.plot.fun = grid.points,
edge.color = "black",
node.color = "black",
tip.color = "black",
edge.width = 1,
...
)
creates a plot on the current graphics device.
A list created by the phyloXXYY
function
A character string indicating the shape of plotted tree
Logical, indicating whether tip labels should be shown
Logical, indicating whether node labels should be shown
Numeric indicating the rotation of the plot in degrees
A function used to plot the data elements of a
phylo4d
object
A vector of colors in the order of edges(phy)
A vector of colors indicating the colors of the node labels
A vector of colors indicating the colors of the tip labels
A vector in the order of edges(phy)
indicating the
widths of edge lines
Additional parameters passed to tip.plot.fun
Peter Cowan