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phyloland (version 1.0)

Modelling Competitive Exclusion and Limited Dispersal in a Statistical Phylogeographic Framework

Description

This package implements a model of space colonization mapped on a phylogeny, it aims at estimating limited dispersal and competitive exclusion in a statistical phylogeographic framework. (see phyloland-package for details.)

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Version

Install

install.packages('phyloland')

Monthly Downloads

6

Version

1.0

License

GPL (>= 2.0)

Maintainer

Louis Ranjard

Last Published

March 7th, 2014

Functions in phyloland (1.0)

PLD_plot_stat_mig

Plot dispersal statistics
phyloland-internal

Internal phyloland Functions
phyloland-package

Modelling competition and dispersal in a statistical phylogeographic framework
PLD_loc_mrca

Location of Most Recent Common Ancestor
PLD_stat_mig

Dispersal statistics
tree_Banza

Phylogenetic tree of Banza
PLD_plot_trees

Plot sampled trees
Banza

Banza MCMC output
PLD_interface

Model parameters and internal locations estimations