mean_dist

list of pairwise distance matrices stored as CSVs or .rds
with the same dimensions.

files

tips

Further arguments passed to or from other methods.

This function generates the mean pairwise distance matrix from a set
many pairwise distance matrices. Note: all matrices should be of the same dimension.

Computational infrastructure for biogeography, community ecology,
and biodiversity conservation (Daru et al. 2020) <doi:10.1101/2020.02.12.945691>. It is
based on the conceptual work in Daru et al.(2017) <doi:10.1016/j.tree.2017.08.013> on
patterns and processes of biogeographical regionalization. Additionally, the package
contains fast and efficient functions to compute more standard conservation measures
such as phylogenetic diversity, phylogenetic endemism, evolutionary distinctiveness
and global endangerment, as well as compositional turnover (e.g., beta diversity).

Barnabas H. Daru

phyloregion

mean_dist: Mean distance matrix from a set of distance matrices

Description

Usage

Arguments

Value