attachSeqToNode.PhyloSim

PhyloSim.attachSeqToNode

attachSeqToNode,PhyloSim-method

this

node

Assotiate a Sequence object with a given node of a phylo object aggregated by a PhyloSim object.
This method is mainly used internally.

An extensible object-oriented framework for the Monte Carlo simulation of sequence evolution written in 100 percent R. It is built on the top of the R.oo and ape packages and uses Gillespie's direct method to simulate substitutions, insertions and deletions. Citation: Botond Sipos, Tim Massingham, Gregory E Jordan and Nick Goldman (2011) PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment <doi:10.1186/1471-2105-12-104>.

Botond Sipos

phylosim

Flexible Simulations of Biological Sequence Evolution

attachSeqToNode.PhyloSim function

Assotiate a Sequence object with a given node of a phylo object aggregated by a PhyloSim object — attachSeqToNode.PhyloSim

Assotiate a Sequence object with a given node of a phylo object aggregated by a PhyloSim object

attachSeqToNode.PhyloSim: Assotiate a Sequence object with a given node of a phylo object aggregated by a PhyloSim object

Description

Usage

Arguments

Value

See Also