checkConsistency.Sequence

Sequence.checkConsistency

checkConsistency,Sequence-method

this

<p>Do not check aggregated site objects.</p>

omit.sites

An extensible object-oriented framework for the Monte Carlo simulation of sequence evolution written in 100 percent R. It is built on the top of the R.oo and ape packages and uses Gillespie's direct method to simulate substitutions, insertions and deletions. Citation: Botond Sipos, Tim Massingham, Gregory E Jordan and Nick Goldman (2011) PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment <doi:10.1186/1471-2105-12-104>.

Botond Sipos

phylosim

Flexible Simulations of Biological Sequence Evolution

checkConsistency.Sequence function

Check object consistency — checkConsistency.Sequence

Check object consistency

checkConsistency.Sequence: Check object consistency

Description

Usage

Arguments

Value

See Also