phylosim (version 3.0.5)

globalConsistencyCheck.PSRoot: Check the consistency of all objects inheriting form PSRoot in the current environment

Description

Check the consistency of all objects inheriting form PSRoot in the current environment.

This method searches for objects which inherit from PSRoot and calls checkConsistency() for all of them, which can take a lots of time. Prints the results of the checks as text.

Usage

# S3 method for PSRoot
globalConsistencyCheck(...)

Arguments

...

Not used.

Value

Returns invisible TRUE if all checks are successful.

See Also

For more information see PSRoot.

Examples

# NOT RUN {
	# create some objects
	a<-NucleotideAlphabet()
	s<-Site()
	p<-Process()
	# ask for a global consistency check
	PSRoot$globalConsistencyCheck();
 
# }