setCumulativeRates.Sequence

Sequence.setCumulativeRates

setCumulativeRates,Sequence-method

this

value

<p>Forbidden action: setting the cumulative rates for the sites aggregated by a Sequence object.</p>

An extensible object-oriented framework for the Monte Carlo simulation of sequence evolution written in 100 percent R. It is built on the top of the R.oo and ape packages and uses Gillespie's direct method to simulate substitutions, insertions and deletions. Citation: Botond Sipos, Tim Massingham, Gregory E Jordan and Nick Goldman (2011) PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment <doi:10.1186/1471-2105-12-104>.

Botond Sipos

phylosim

Flexible Simulations of Biological Sequence Evolution

setCumulativeRates.Sequence function

Forbidden action: setting the cumulative rates for the sites aggregated by a Sequence object — setCumulativeRates.Sequence

Forbidden action: setting the cumulative rates for the sites aggregated by a Sequence object

setCumulativeRates.Sequence: Forbidden action: setting the cumulative rates for the sites aggregated by a Sequence object

Description

Usage

Arguments

Value

See Also