setSequences.PhyloSim

PhyloSim.setSequences

setSequences,PhyloSim-method

this

value

<p>Forbidden action: setting the Sequence objects associated with the nodes of a phylo object aggregated by a PhyloSim object.</p>

An extensible object-oriented framework for the Monte Carlo simulation of sequence evolution written in 100 percent R. It is built on the top of the R.oo and ape packages and uses Gillespie's direct method to simulate substitutions, insertions and deletions. Citation: Botond Sipos, Tim Massingham, Gregory E Jordan and Nick Goldman (2011) PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment <doi:10.1186/1471-2105-12-104>.

Botond Sipos

phylosim

Flexible Simulations of Biological Sequence Evolution

setSequences.PhyloSim function

Forbidden action: setting the Sequence objects associated with the nodes of a phylo object aggregated by a PhyloSim object — setSequences.PhyloSim

Forbidden action: setting the Sequence objects associated with the nodes of a phylo object aggregated by a PhyloSim object

setSequences.PhyloSim: Forbidden action: setting the Sequence objects associated with the nodes of a phylo object aggregated by a PhyloSim object

Description

Usage

Arguments

Value

See Also