phytools (version 0.2-40)

ave.rates: Average the posterior rates

Description

Primarily internal function for posterior.evolrate.

Usage

ave.rates(tree, shift, tips, sig1, sig2, ave.shift, showTree=TRUE)

Arguments

tree

a tree.

shift

the shift point for this sample.

tips

tip names tipward of shift.

sig1

rate 1.

sig2

rate 2.

ave.shift

average shift from all samples.

showTree

logical value indicating whether to plot the rate-stretched tree.

Value

• a list of the rates.

See Also

evol.rate.mcmc, minSplit, posterior.evolrate