"phylo"
object with a mapped binary or multistate trait (see read.simmap
) while maintaining the matrix $mapped.edge
and list of mappings by branch maps
. This function is equivalent to drop.tip
but for a tree with a mapped discrete character.
extract.clade.simmap
is functionally equivalent to extract.clade
but preserves discrete character mappings on the tree.drop.tip.simmap(tree, tip)
extract.clade.simmap(tree, node)
"phylo"
(see read.simmap
)."phylo"
containing the elements maps
and $mapped.edge
with the time spent in each state along each edge of the tree.brownie.lite
, drop.tip
, extract.clade
, make.simmap
, read.simmap
, sim.history