"multiPhylo"
with a mapped discrete character (e.g., see read.simmap
and sorts the columns of each tree$mapped.edge
to have the same state ordering. Also works for a single tree.orderMappedEdge(trees, ordering=NULL)
"phylo"
or "multiPhylo"
.$mapped.edge
. If NULL
, then an alphabetical order is assumed. Options are "alphabetical"
, "numerical"
, or any specific ordering of the mapped traits (e.g., c("A","B","C"
"phylo"
or "multiPhylo"
.