pi0 (version 1.4-1)

lfdr and ppee: Local False Discovery Rates (lfdr), i.e., Posterior Probability of Equivalent Expression (ppee) for gene expression profiling data.

Description

These functions return pi0*(null test statistic density)/(marginal test statistic density).

Usage

lfdr(object, ...)
ppee(object, ...)
# S3 method for default
lfdr(object, ...)

# S3 method for parncpt
lfdr(object, ...)

# S3 method for sparncpt
lfdr(object, ...)

# S3 method for nparncpt
lfdr(object, ...)

# S3 method for nparncpp
lfdr(object, ...)

# S3 method for CBUM
lfdr(object, ...)

# S3 method for znormix
lfdr(object, ...)

# S3 method for convest
lfdr(object, ...)

# S3 method for discTMix
lfdr(object, ...)

Arguments

object

an object of corresponding classes.

…

Other arguments currently not used.

Value

A numeric vector of lfdr.

See Also

parncpt, nparncpt, sparncpt, nparncpp, fdr, CBUM, znormix, convest, discTMix