check_model_type

Checks if model type is valid
Will <a href="/link/stop?package=pirouette&version=1.6.9" data-mini-rdoc="pirouette::stop">stop</a> if not.

Theoretical biologists are interested in measuring the extent
at which we can measure the truth. This package allows to
create a Bayesian posterior from a phylogeny that depicts
the true evolutionary relationships. The given and true phylogeny
can than be compared to the posterior phylogenies.
Richèl J. C. Bilderbeek, Giovanni Laudanno, Rampal S. Etienne (2020)
"Quantifying the impact of an inference model in Bayesian phylogenetics"
<doi:10.1111/2041-210X.13514>.

Richel Bilderbeek

pirouette

Create a Bayesian Posterior from a Phylogeny

Richèl J.C. Bilderbeek

Giovanni Laudanno

Thijs Janzen

check_model_type function

<dl><dt>model_type</dt>
<dd>type of inference model supplied for an experiment.
Possible values:<ul>
<li><code>generative</code>: the inference model is (or is assumed to be)
 the inference model underlying the phylogeny</li>
<li><code>candidate</code>: the inference model is a candidate model,
 that competes with other models for having the most
 evidence (aka highest marginal likelihood)</li>
</ul></dd></dl>

Arguments

Giovanni Laudanno, Richèl J.C. Bilderbeek

Author

Checks if model type is valid
Will <a href='https://rdrr.io/r/base/stop.html'>stop</a> if not.

Checks if model type is valid
Will stop if not. — check_model_type

<dl>

<dt>model_type</dt>
<dd>type of inference model supplied for an experiment.
Possible values:<ul>
<li><code>generative</code>: the inference model is (or is assumed to be)
 the inference model underlying the phylogeny</li>
<li><code>candidate</code>: the inference model is a candidate model,
 that competes with other models for having the most
 evidence (aka highest marginal likelihood)</li>
</ul></dd>

</dl>

check_model_type: Checks if model type is valid Will stop if not.

Description

Usage

Value

Arguments

Author

Examples