pirouette (version 1.6.9)

pir_plot: Plot the error 'BEAST2' makes from a known phylogeny

Description

Plot the error 'BEAST2' makes from a known phylogeny

Usage

pir_plot(pir_out, verbose = FALSE)

Value

a ggplot2 plot

Arguments

pir_out

the output of pir_run

verbose

if TRUE, show more output

Author

Richèl J.C. Bilderbeek, Giovanni Laudanno

See Also

• Use create_test_pir_run_output to create a test output of pir_run.

• Use pir_plot_from_file to plot the errors after have being saved to a .csv file

• Use pir_plots to plot the output of multiple runs, for example, the output of pir_runs

Examples

pir_out <- create_test_pir_run_output(
  add_twin = TRUE,
  add_best = TRUE
)
pir_plot(pir_out)