pir_plot_from_file

Plot the error BEAST2 make from the known phylogeny

Theoretical biologists are interested in measuring the extent
at which we can measure the truth. This package allows to
create a Bayesian posterior from a phylogeny that depicts
the true evolutionary relationships. The given and true phylogeny
can than be compared to the posterior phylogenies.
Richèl J. C. Bilderbeek, Giovanni Laudanno, Rampal S. Etienne (2020)
"Quantifying the impact of an inference model in Bayesian phylogenetics"
<doi:10.1111/2041-210X.13514>.

Richel Bilderbeek

pirouette

Create a Bayesian Posterior from a Phylogeny

Richèl J.C. Bilderbeek

Giovanni Laudanno

Thijs Janzen

pir_plot_from_file function

<dl><dt>pir_out_filename</dt>
<dd>name of the file with the saved
output as created by <code>pir_run</code></dd></dl>

Arguments

Author

Plot the error BEAST2 make from the known phylogeny — pir_plot_from_file

<dl>

<dt>pir_out_filename</dt>
<dd>name of the file with the saved
output as created by <code>pir_run</code></dd>

</dl>

pir_plot_from_file: Plot the error BEAST2 make from the known phylogeny

Description

Usage

Value

Arguments

Author

See Also